Forward-time population genetic simulation in Python
fwdpy11
This is the README for fwdpy11_, which is a Python package for forward-time population genetic simulation. It uses fwdpp_ as its C++ back-end.
Main:
.. image:: https://github.com/molpopgen/fwdpy11/workflows/Tests/badge.svg?branch=main :target: https://github.com/molpopgen/fwdpy11/workflows/Tests/badge.svg?branch=main
.. image:: https://github.com/molpopgen/fwdpy11/workflows/UbuntuStressTest/badge.svg?branch=main :target: https://github.com/molpopgen/fwdpy11/workflows/UbuntuStressTest/badge.svg?branch=main
Development:
.. image:: https://github.com/molpopgen/fwdpy11/workflows/Tests/badge.svg?branch=dev :target: https://github.com/molpopgen/fwdpy11/workflows/Tests/badge.svg?branch=dev
.. image:: https://github.com/molpopgen/fwdpy11/workflows/UbuntuStressTest/badge.svg?branch=dev :target: https://github.com/molpopgen/fwdpy11/workflows/UbuntuStressTest/badge.svg?branch=dev
.. image:: https://anaconda.org/bioconda/fwdpy11/badges/version.svg
:target: https://anaconda.org/bioconda/fwdpy11
.. image:: https://anaconda.org/bioconda/fwdpy11/badges/platforms.svg
:target: https://anaconda.org/bioconda/fwdpy11
Python code style:
.. image:: https://img.shields.io/badge/code%20style-black-000000.svg :target: https://github.com/psf/black
The manual can be found here <https://molpopgen.github.io/fwdpy11>
_.
GPLv3 or later (See COPYING)
fwdpy11 is written for Python 3. We will not modify the package to be compatible with Python 2.7.
These topics are covered in the user manual:
fwpdy11
should see this section <https://molpopgen.github.io/fwdpy11/pages/userenv.html>
_.the developer's guide <https://molpopgen.github.io/fwdpy11/misc/developersguide.html>
_... _fwdpy11: https://github.com/molpopgen/fwdpy11 .. _fwdpp: https://github.com/molpopgen/fwdpp .. _GSL: http://gnu.org/software/gsl .. _pybind11: https://github.com/pybind/pybind11 .. _multiprocessing: https://docs.python.org/3/library/multiprocessing.html .. _concurrent.futures: https://docs.python.org/3/library/concurrent.futures.html .. _bioconda: https://bioconda.github.io/ .. _release: https://github.com/molpopgen/fwdpy11/releases .. _cmake: https://cmake.org